Yeah, i have the problem mainly with the passenger side one.
Simple fix (but expensive...) Get yourself a girlfriend who knows when you put the window up she has to pull it backwards a bit. Once trained, it works every time 
I was going to replace the window rubber/felt channels on all doors until I found out you can only get the moulded ones from FORD themselves and it was a cost of $60 per door! I will do something one day.....
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EA Fairmont Ghia : 3.9L MPFI, 2.5" cat back sports exhaust, K&N panel filter. Pioneer head unit, pioneer 4" three way fronts, Pioneer 6" 3 way rears, 2x 12" subs, blue interior light.
My main pride and joy : '76 XB Fairmont GS, 250CI, 140,000 Km and all stock.... for now! (Factory air-con on the way)
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